Publications

The following are publications made possible by iCER resources. MSU faculty that would like to highlight the output of their research that's benefited from iCER resources are invited to contact us.

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M. Gerber, Chai, J. Y., and Meyers, A., The Role of Implicit Argumentation in Nominal SRL, in North American Chapter of the Association for Computational Linguistics, Boulder, Colorado, USA, 2009.
A. Niavarani and Priezjev, N. V., Rheological study of polymer flow past rough surfaces with slip boundary conditions, Journal of Chemical Physics, vol. 129, no. 14, 2008.
M. Kulke and Vermaas, J. V., Reversible Unwrapping Algorithm for Constant-Pressure Molecular Dynamics Simulations, Journal of Chemical Theory and Computation, vol. 18, no. 10, pp. 6161 - 6171, 2022.
P. Piecuch, Wloch, M., and Verandas, A. J. C., Renormalized Coupled-Cluster Methods: Theoretical Foundations and Application to Potential Function of Water, in Progress in Theoretical Chemistry and Physics, vol. 16, no. Part 1, 2007, pp. 63-121.
P. Piecuch and Wloch, M., Renormalized coupled-cluster methods exploiting left eigenstates of the similarity-transformed Hamiltonian, The Journal of Chemical Physics, vol. 123, no. 22, pp. 224105–10, 2005.
K. A., Chun, H. - C., Mazer, M., Wang, W., Rose, J. B., Smucker, A., and Rivers, M., Relationships between intra-aggregate pore structures and distributions of Escherichia coli within soil macro-aggregates, Applied Soil Ecology, vol. 63, pp. 134-142, 2013.
N. V. Priezjev, Relationship between induced fluid structure and boundary slip in nanoscale polymer films, Physical Review E, vol. 82, 2010.
D. Colbry, Reducing the barrier to entry using portable apps, in Proceedings of the 2011 TeraGrid Conference: Extreme Digital Discovery, New York, NY, USA, 2011, p. 47.
N. V. Priezjev, Rate-dependent slip boundary conditions for simple fluids, Physical Review E, vol. 75, no. 5, p. 51605, 2007.
I. M. Morris, Klink, K., Singh, J. T., Mendoza-Cortes, J. L., Nicley, S. S., and Becker, J. N., Rare isotope-containing diamond colour centres for fundamental symmetry tests, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol. 382, no. 2265, p. 20230169, 2023.
F. Delano IV, Castellanos, E., McCracken, J., and Demir, S., A rare earth metallocene containing a 2{,}2′-azopyridyl radical anion, Chem. Sci., p. -, 2021.
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R. Walker, Moore, N., Arima, E., Perz, S., Simmons, C., Caldas, M., Vergara, D., and Bohrer, C., Protecting the Amazon with Protected Areas, PNAS, vol. 106, 2009.
E. J. Hallman, Skillman, S. W., ,, Smith, B. D., O'Shea, B. W., Burns, J. O., and Norman, M. L., The Properties of X-ray Cold Fronts in a Statistical Sample of Simulated Galaxy Clusters, \apj, vol. 725, pp. 1053-1068, 2010.
C. Shen and Phanikumar, M., A Process-Based, Distributed Hydrologic Model Based on a Large-Scale Method for Surface - Subsurface Coupling, Advances in Water Resources, Advances in Water Resources, vol. 33, 2010.
C. Shen, A process-based distributed hydrologic model and its application to a Michigan watersed, Michigan State University, East Lansing, 2009.
C. Shen, A process-based distributed hydrologic model and its application to a Michigan watershed, Michigan State University, East Lansing, 2009.
B. Ong, Russell, R., and Ruuth, S., Proceedings of the 21st International Meshing Roundtable: An h-r Moving Mesh Method for One-Dimensional Time-Dependent PDEs. Berlin, Heidelberg: Springer Berlin Heidelberg, 2013, pp. 39 - 54.
S. M. Gopal, Mukherjee, S., Cheng, Y. - M., and Feig, M., PRIMO/PRIMONA: A coarse-grained model for proteins and nucleic acids that preserves near-atomistic accuracy, Proteins: Structure, Function, and Bioinformatics, vol. 78, no. 5, pp. 1266-1281, 2010.
K. Scott Enger, Preventing diarrheal infections with household water treatment: lessons from simulation models, 2012.
M. Kulke, Kurtz, E., Boren, D. M., Olson, D. M., Koenig, A. M., Hoffmann-Benning, S., and Vermaas, J. V., PLAT domain protein 1 (PLAT1/PLAFP) binds to the Arabidopsis thaliana plasma membrane and inserts a lipid, vol. 338, p. 111900, 2023.
S. Raza, Miller, M., Hamberger, B., and Vermaas, J. V., Plant Terpenoid Permeability through Biological Membranes Explored via Molecular Simulations, The Journal of Physical Chemistry B, vol. 127, no. 5, pp. 1144 - 1157, 2023.
Z. Wang, Belecciu, T., Eaves, J., Reimers, M., Bachmann, M., and Woldring, D., Phytochemical drug discovery for COVID-19 using high-resolution computational docking and machine learning assisted binder prediction, Journal of Biomolecular Structure and Dynamics, pp. 1 - 21, 2022.
D. Do, Ozolins, V., Mahanti, S. D., Lee, M. - S., Zhang, Y., and Wolverton, C., Physics of bandgap formation in Cu–Sb–Se based novel thermoelectrics: the role of Sb valency and Cu d levels, IOP Science, vol. 24, no. 41, 2012.
J. Clune, Stanley, K. O., Pennock, R. T., and Ofria, C., On the Performance of Indirect Encoding Across the Continuum of Regularity, IEEE Transactions on Evolutionary Computation, 2011.
S. Raza, Sievertsen, T. H., Okumoto, S., and Vermaas, J. V., Passive permeability controls synthesis for the allelochemical sorgoleone in sorghum root exudate, vol. 217, p. 113891, 2023.

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